Text Mining Software

Nationalt Genom Center

The vision of NGC is to create a foundation for the development of a more precise diagnosis, targeted treatment and strengthened research within the Danish healthcare system. To achieve this vision, the core mission of the NGC, is to establish and operate a state-of-the-art and secure national infrastructure for personalised medicine in cooperation with the Regions and universities.
The NGC will perform whole genome sequencing and bioinformatics analysis of samples from the regional healthcare system. The solution should be versatile and will be used to assist in the interpretation of data from many different patient groups.
NGC wants to offer the text mining software solution to the Regions and to Universities for clinical use as well as for research. Thus the solution is not limited to the interpretation of clinical samples.
The solution will be used by clinical scientists from the regional healthcare system as well as researchers from the universities.

Deadline

Fristen for modtagelse af bud var på 2021-07-26. Indkøbet blev offentliggjort på 2021-06-21.

Hvem? Hvad? Hvor?
Indkøbshistorik
Dato Dokument
2021-06-21 Udbudsbekendtgørelse
2021-08-16 Bekendtgørelse om indgåede kontrakter
Udbudsbekendtgørelse (2021-06-21)
Objekt
Omfanget af udbuddet
Titel: Programpakker og informationssystemer
Kort beskrivelse:
The vision of NGC is to create a foundation for the development of a more precise diagnosis, targeted treatment and strengthened research within the Danish healthcare system. To achieve this vision, the core mission of the NGC, is to establish and operate a state-of-the-art and secure national infrastructure for personalised medicine in cooperation with the Regions and universities. The NGC will perform whole genome sequencing and bioinformatics analysis of samples from the regional healthcare system. The solution should be versatile and will be used to assist in the interpretation of data from many different patient groups. NGC wants to offer the text mining software solution to the Regions and to Universities for clinical use as well as for research. Thus the solution is not limited to the interpretation of clinical samples. The solution will be used by clinical scientists from the regional healthcare system as well as researchers from the universities.
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Bekendtgørelsens metadata
Originalsprog: engelsk 🗣️
Dokumenttype: Udbudsbekendtgørelse
Kontraktens art: Varer
Forordning: Den Europæiske Union, med deltagelse af GPA-lande
Fælles glossar for offentlige kontrakter (CPV)
Kode: Programpakker og informationssystemer 📦
Yderligere CPV-kode: Klinisk oplysningssystem 📦
Sted for udførelsen
NUTS-region: Danmark 🏙️

Procedure
Procedureform: Offentligt udbud
Bud-type: Indsendelse gældende for alle delaftaler
Kriterier for tildeling
Det økonomisk mest fordelagtige bud

Ordregivende myndighed
Identitet
Land: Danmark 🇩🇰
Type af ordregivende myndighed: Ministerium eller anden myndighed på nationalt plan eller forbundsplan
Navn på ordregivende myndighed: Nationalt Genom Center
Postadresse: Ørestads Boulevard 5
Postnummer: 2300
Postby: København S
Kontakt
Internetadresse: https://ngc.dk/ 🌏
E-mail: eks_albu@ngc.dk 📧
Telefon: +45 24971765 📞
URL til dokumenter: http://eu.eu-supply.com/app/rfq/rwlentrance_s.asp?PID=305051&B=DK_UDBUD 🌏
URL til deltagelse: http://eu.eu-supply.com/app/rfq/rwlentrance_s.asp?PID=305051&B=DK_UDBUD 🌏

Reference
Datoer
Afsendelsesdato: 2021-06-21 📅
Tilbudsfrist: 2021-07-26 📅
Offentliggørelsesdato: 2021-06-25 📅
Identifikatorer
Bekendtgørelsesnummer: 2021/S 121-318249
EUT-S-nummer: 121

Objekt
Omfanget af udbuddet
Kort beskrivelse:
The vision of NGC is to create a foundation for the development of a more precise diagnosis, targeted treatment and strengthened research within the Danish healthcare system. To achieve this vision, the core mission of the NGC, is to establish and operate a state-of-the-art and secure national infrastructure for personalised medicine in cooperation with the Regions and universities.
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The NGC will perform whole genome sequencing and bioinformatics analysis of samples from the regional healthcare system. The solution should be versatile and will be used to assist in the interpretation of data from many different patient groups.
NGC wants to offer the text mining software solution to the Regions and to Universities for clinical use as well as for research. Thus the solution is not limited to the interpretation of clinical samples.
The solution will be used by clinical scientists from the regional healthcare system as well as researchers from the universities.
The National Genome Center (NGC) is established as an element of the realisation of the National Strategy for Personalised Medicine 2017–2020 and is intended to ensure governance and coordination of the strategy’s initiatives at the national level. The Danish efforts within Personalised Medicine are to focus on the patients.
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The solution will be used by clinical scientists from the regional healthcare system as well as researchers from the universities. They will log into the NCG HPC system and access the solution preferably through third party interpretation software, or directly via an internet browser. With the text mining software solution they should be able to filter variants based on several criteria, e.g. mutation type, ACMG criteria, location in gene/genome, etc.
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This section clarifies that any standard terms that are in conflict with the described use of licenses are set a side.
Varighed: 36 måneder
Beskrivelse af fornyelser: 2x1 year

Juridiske, økonomiske, finansielle og tekniske oplysninger
Betingelser for deltagelse
Økonomisk og finansiel stilling:
The Tenderer must meet the following requirements:
• the general average turnover in the last three audited financial years must be minimum USD 1 200 000 per year;
• the average profit margin in the last three audited financial years must be minimum 0; and
• the solvency ratio in the last audited financial year must be minimum 0.
Teknisk og faglig kompetence:
The Tenderer must meet the following requirements:
• three references from similar contracts within clinical diagnostics;
• the contracts must be in progress, i.e. have passed initial tests and be/have been in use;
• the contracts must entail a Minimum of 20 simultaneous users;
• the references must not be more than 5 years old from application date.

Procedure
Retsgrundlag: 32014L0024
Tidspunkt for modtagelse af tilbud: 12:00
Sprog, på hvilke bud eller ansøgninger om deltagelse kan indgives: engelsk 🗣️
Tilbuddets gyldighedsperiode: 3 måneder
Dato for åbning af tilbud: 2021-07-26 📅
Tidspunkt for åbning af tilbud: 12:00

Ordregivende myndighed
Identitet
Nationalt registreringsnummer: 39851490
Kontakt
Enhed: Alexi Bergmann Burns-Tang
Køberprofilens adresse: https://eu.eu-supply.com/ctm/Company/CompanyInformation/Index/436453 🌏
URL til dokumenter: http://eu.eu-supply.com/app/rfq/rwlentrance_s.asp?PID=305051&B=DK_UDBUD 🌏

Supplerende oplysninger
Gennemgå organ
Navn: Klagenævnet for Udbud
Postadresse: Nævnenes Hus, Toldboden 2
Postby: Viborg
Postnummer: 8800
Land: Danmark 🇩🇰
Telefon: +45 35291000 📞
E-mail: klfu@naevneneshus.dk 📧
Internetadresse: https://erhvervsstyrelsen.dk/klagevejledning-0 🌏
Oplysninger om frister for klageprocedurer:
Klagenævnet for Udbud) § 7, Section 1. Complaint regarding the award of contract:
Complaint regarding the award of contract must be submitted no later than 45 calendar days from the date after the Contracting Authority has published a contract award notice in the European Union Official Journal informing that the Contracting Authority has awarded the contract, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 2, No 1. Complaint regarding the award of a contract under a framework agreement with a reopening of the competition: complaint regarding the award of a contract under a framework agreement with a reopening of the competition must be submitted no later than 30 calendar days form the date after the contracting authority has notified the concerned tenderers that a contract has been awarded, if the notification includes the grounds for the decision, Cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 2, No 2. Complaint regarding the award of a framework agreement:
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Complaint regarding the award of a framework agreement must be submitted no later than 6 months from the date after the contracting authority have notified the concerned candidates and tenderers that award of contract has happened, cf. Law Regarding the Complaints board (in Danish Klagenævnet for Udbud) § 7, Section 2, No 3. Complaint regarding direct award of contract:
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Complaint regarding the Contracting Authority’s award of contract without prior publication of a contract notice in the European Union Official Journal must be VI.4.4) submitted no later than 30 calendar days from the date after a contract award notice has been published by the contracting authority in the European Union Official Journal and that contract award notice includes the grounds for the decision to award the contract directly, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7. Section 3, Compliant regarding public procurements below the EU threshold:
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Complaint regarding public procurements below the EU threshold must be Submitted no later than 45 calendar days from the date after the contracting authority has notified the tenderers about the award of contract if this notification includes the grounds for the decision; and no later than 6 months after the date where the Contracting Authority has notified the candidates and tenderers about that award of a framework agreement, if the notification includes the grounds for the decision, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, section 4, No 1 and 2. Compliant regarding a decision on shortlisting on procurement below the EU threshold must be submitted no later than 20 calendar days from the date after the contracting authority has sent a notification to the concerned candidates regarding who has been selected and this notification includes the grounds for the decision, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 5.
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Tjeneste, hvorfra der kan indhentes oplysninger om klageproceduren
Navn: Konkurrence- og Forbrugerstyrelsen
Postadresse: Carl Jacobsens Vej 35
Postby: Valby
Postnummer: 2500
Telefon: +45 41715000 📞
E-mail: kfst@kfst.dk 📧
Internetadresse: http://www.kfst.dk 🌏
Kilde: OJS 2021/S 121-318249 (2021-06-21)
Bekendtgørelse om indgåede kontrakter (2021-08-16)
Objekt
Bekendtgørelsens metadata
Dokumenttype: Bekendtgørelse om indgåede kontrakter

Procedure
Bud-type: Finder ikke anvendelse

Reference
Datoer
Afsendelsesdato: 2021-08-16 📅
Offentliggørelsesdato: 2021-08-20 📅
Identifikatorer
Bekendtgørelsesnummer: 2021/S 161-422872
Henviser til bekendtgørelse: 2021/S 121-318249
EUT-S-nummer: 161
Yderligere oplysninger
The process has shown the need to specify some of our requirements, in order to get the product we need and to secure that there is competition.

Objekt
Omfanget af udbuddet
Kort beskrivelse:
The NGC will perform whole genome sequencing and bioinformatics analysis of samples from the regional
healthcare system. The solution should be versatile and will be used to assist in the interpretation of data from many different patient groups.
The solution will be used by clinical scientists from the regional healthcare system as well as researchers from the universities. They will log into the NCG HPC system and access the solution preferably through third party interpretation software, or directly via an internet browser. With the text mining software solution they should be able to filter variants based on several criteria, e.g. mutation type, ACMG criteria, location in gene/genome etc..
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Procedure
Kriterier for tildeling
Kvalitetskriterium (navn): Quality - written responcse
Kvalitetskriterium (vægtning): 60 %
Pris (justeringskoefficient): 40 %

Supplerende oplysninger
Gennemgå organ
Oplysninger om frister for klageprocedurer:
Precise information on deadline(s) for review procedures:
Klagenævnet for Udbud) § 7, Section 1. Complaint regarding the award of contract: Complaint regarding the award of contract must be submitted no later than45 calendar days from the date after the Contracting Authority has published a contract award notice in the European Union Official Journal informing that the Contracting Authority has awarded the contract, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 2, No 1. Complaint regarding the award of a contract under a Framework Agreement with a reopening of the competition: complaint regarding the award of a contract under a Framework Agreement with a reopening of the competition must be submitted no later than 30 calendar days form the date after the Contracting Authority has notified the concerned tenderers that a contract has been awarded, if the notification includes the grounds for the decision, Cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 2, No 2. Complaint regarding the award of a Framework Agreement: Complaint regarding the award of a Framework Agreement must be submitted no later than 6 months from the date after the Contracting Authority have notified the concerned candidates and tenderers that award of contract has happened, cf. Law Regarding the Complaints board (in Danish Klagenævnet for Udbud) § 7, Section 2, No 3. Complaint regarding direct award of contract: Complaint regarding the Contracting Authority’s award of contract without prior publication of a Contract Notice in the European Union Official Journal must be VI.4.4) submitted no later than 30 calendar days from the date after a contract award notice has been published by the Contracting Authority in the European Union Official Journaland that contract award notice includes the grounds for the decision to award the contract directly, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 3. Compliant regarding public procurements below the EU threshold: Complaint regarding public procurements below the EU threshold must be Submitted no later than 45 calendar days from the date after the Contracting Authority has notified the tenderers about the award of contract if this notification includes the grounds for the decision; and no later than 6 months after the date where the Contracting Authority has notified the candidates and tenderers
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5 / 5
about that award of a Framework Agreement, if the notification includes the grounds for the decision, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, section 4, No 1 and 2. Compliant regarding a decision on shortlisting on procurement below the EU threshold must be submitted no later than 20 calendar days from the date after the Contracting Authority has sent a notification to the concerned candidates regarding who has been selected and this notification includes the grounds for the decision, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 5.
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Kilde: OJS 2021/S 161-422872 (2021-08-16)
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