Interpretation Tool for Variant Analysis

Statens Serum Institut

The NGC will perform whole genome sequencing and bioinformatics analysis of samples from the regional healthcare system. The solution should be versatile and will be used for interpretation of data from the different patient groups. Initially the patient group is rare disease among children and young under 18 years. This group will for many cases be trio analysis and this should be supported by the interpretation solution.
The solution will be used by the clinical scientist from the regional healthcare system. They will log into the NCG HPC system and access the relevant files from the bioinformatics analysis. With the interpretation solution they should be able to filter the data based on several sources of information, e.g. knowledge of frequencies within reference data, effect of the detected variants, possible inheritance pattern and phenotype information.

Deadline

Fristen for modtagelse af bud var på 2020-07-23. Indkøbet blev offentliggjort på 2020-06-23.

Hvem?

• Statens Serum Institut

Hvad?

• Informationssystemer til medicinsk brug › Klinisk oplysningssystem

Hvor?

• Danmark

Indkøbshistorik

Dato	Dokument
2020-06-23	Udbudsbekendtgørelse
2020-08-06	Bekendtgørelse om indgåede kontrakter

Udbudsbekendtgørelse (2020-06-23)
Objekt
Omfanget af udbuddet
Titel: Programpakker og informationssystemer
Kort beskrivelse:

The NGC will perform whole genome sequencing and bioinformatics analysis of samples from the regional healthcare system. The solution should be versatile and will be used for interpretation of data from the different patient groups. Initially the patient group is rare disease among children and young under 18 years. This group will for many cases be trio analysis and this should be supported by the interpretation solution. The solution will be used by the clinical scientist from the regional healthcare system. They will log into the NCG HPC system and access the relevant files from the bioinformatics analysis. With the interpretation solution they should be able to filter the data based on several sources of information, e.g. knowledge of frequencies within reference data, effect of the detected variants, possible inheritance pattern and phenotype information.

Bekendtgørelsens metadata
Originalsprog: engelsk 🗣️
Dokumenttype: Udbudsbekendtgørelse
Kontraktens art: Varer
Forordning: Den Europæiske Union, med deltagelse af GPA-lande
Fælles glossar for offentlige kontrakter (CPV)
Kode: Programpakker og informationssystemer 📦
Yderligere CPV-kode: Klinisk oplysningssystem 📦
Sted for udførelsen
NUTS-region: Danmark 🏙️

Procedure
Procedureform: Offentligt udbud
Bud-type: Indsendelse gældende for alle delaftaler
Kriterier for tildeling
Det økonomisk mest fordelagtige bud

Ordregivende myndighed
Identitet
Land: Danmark 🇩🇰
Type af ordregivende myndighed: Ministerium eller anden myndighed på nationalt plan eller forbundsplan
Navn på ordregivende myndighed: Statens Serum Institut
Postadresse: Artillerivej 5
Postnummer: 2300
Postby: København S
Kontakt
Internetadresse: http://www.ngc.dk 🌏
E-mail: abt@ngc.dk 📧
Telefon: +45 32683268 📞
URL til dokumenter: http://eu.eu-supply.com/app/rfq/rwlentrance_s.asp?PID=273715&B=SSI 🌏
URL til deltagelse: http://eu.eu-supply.com/app/rfq/rwlentrance_s.asp?PID=273715&B=SSI 🌏

Reference
Datoer
Afsendelsesdato: 2020-06-23 📅
Tilbudsfrist: 2020-07-23 📅
Offentliggørelsesdato: 2020-06-26 📅
Identifikatorer
Bekendtgørelsesnummer: 2020/S 122-298714
EUT-S-nummer: 122

Objekt
Omfanget af udbuddet
Kort beskrivelse:

The solution will be used by the clinical scientist from the regional healthcare system. They will log into the NCG HPC system and access the relevant files from the bioinformatics analysis. With the interpretation solution they should be able to filter the data based on several sources of information, e.g. knowledge of frequencies within reference data, effect of the detected variants, possible inheritance pattern and phenotype information.

Anslået samlet værdi: 10 000 000 DKK 💰
Kort beskrivelse:

The National Genome Center (NGC) is established as an element of the realisation of the National Strategy for Personalised Medicine 2017–2020 and is intended to ensure governance and coordination of the strategy’s initiatives at the national level. The Danish efforts within personalised Medicine are to focus on the patients.

The vision of NGC is to create a foundation for the development of a more precise diagnosis, targeted treatment and strengthened research within the Danish healthcare system. To achieve this vision, the core mission of the NGC, is to establish and operate a state-of-the-art and secure national infrastructure for personalised medicine in cooperation with the Regions and universities.

The NGC will perform whole genome sequencing and bioinformatics analysis of samples from the regional healthcare system. The patient groups eligible for sequencing within the NGC framework will be selected through a process involving many stakeholders. It is anticipated that the NGC will sequence approximately 60 000 samples within the next 4 years.

The solution should be versatile and will be used for interpretation of data from the different patient groups. Initially the patient group is rare disease among children and young under 18 years. This group will for many cases be trio analysis and this should be supported by the interpretation solution.

Anslået værdi uden moms: 10 000 000 DKK 💰
Varighed: 48 måneder
Beskrivelse af fornyelser: The contract should run for 4 years with the possibility to renew 2 x 1 year.

Juridiske, økonomiske, finansielle og tekniske oplysninger
Betingelser for deltagelse
Økonomisk og finansiel stilling:

As stated in the instructions to tenderers section 5.2.1

The tenderer must meet the following requirements:

• the general average turnover in the last 3 audited financial years must be minimum USD 4 000 000 per year;

• the average profit margin in the last 3 audited financial years must be minimum 0; and

• the solvency ratio in the last audited financial year must be minimum 0.

Mindstekrav til niveauet:

The tenderer must meet the following requirements:

• the general average turnover in the last 3 audited financial years must be minimum USD 4 000 000 per year,

• the average profit margin in the last 3 audited financial years must be minimum 0; and

• the solvency ratio in the last audited financial year must be minimum 0.

Teknisk og faglig kompetence:

As stated in the instructions to tenderers section 5.2.2

The tenderer must meet the following requirements:

• three references from similar contracts within clinical diagnostics;

• the contracts must be in progress, ie. have past initial tests and be/have been in use;

• the contracts must entail a Minimum of 20 simultaneous users;

• the references must not be more than 5 years old from application date.

Mindstekrav til niveauet:

• three references from similar contracts within clinical diagnostics;

• the contracts must be in progress, ie. have past initial tests and be/have been in use;

• the contracts must entail a Minimum of 20 simultaneous users;

• the references must not be more than 5 years old from application date.

Procedure
Retsgrundlag: 32014L0024
Tidspunkt for modtagelse af tilbud: 12:00
Sprog, på hvilke bud eller ansøgninger om deltagelse kan indgives: engelsk 🗣️
Dato for åbning af tilbud: 2020-07-23 📅
Tidspunkt for åbning af tilbud: 12:00

Ordregivende myndighed
Identitet
Nationalt registreringsnummer: 46837428
Kontakt
Enhed: Alexi Burns-Tang
Internetadresse: www.ngc.dk 🌏
Køberprofilens adresse: https://eu.eu-supply.com/ctm/Company/CompanyInformation/Index/244516 🌏
URL til dokumenter: http://eu.eu-supply.com/app/rfq/rwlentrance_s.asp?PID=273715&B=SSI 🌏

Supplerende oplysninger
Gennemgå organ
Navn: Klagenævn for Udbud
Postby: Viborg
Land: Danmark 🇩🇰
Oplysninger om frister for klageprocedurer:

Klagenævnet for Udbud) § 7, Section 1.

Complaint regarding the award of contract: Complaint regarding the award of contract must be submitted no later than 45 calendar days from the date after the contracting authority has published a contract award notice in the European Union Official Journal informing that the contracting authority has awarded the contract, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 2, No 1.

Complaint regarding the award of a contract under a framework agreement with a reopening of the competition: complaint regarding the award of a contract under a framework agreement with a reopening of the competition must be submitted no later than 30 calendar days form the date after the contracting authority has notified the concerned tenderers that a contract has been awarded, if the notification includes the grounds for the decision, Cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 2, No 2.

Complaint regarding the award of a framework agreement: Complaint regarding the award of a framework agreement must be submitted no later than 6 months from the date after the contracting authority have notified the concerned candidates and tenderers that award of contract has happened, cf. Law Regarding the Complaints board (in Danish Klagenævnet for Udbud) § 7, Section 2, No 3.

Complaint regarding direct award of contract: Complaint regarding the contracting authority’s award of contract without prior publication of a contract notice in the European Union Official Journal must be VI.4.4) submitted no later than 30 calendar days from the date after a contract award notice has been published by the contracting authority in the European Union Official Journal and that contract award notice includes the grounds for the decision to award the contract directly, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 3. Compliant regarding public procurements below the EU threshold: Complaint regarding public procurements below the EU threshold must be submitted no later than 45 calendar days from the date after the contracting authority has notified the tenderers about the award of contract if this notification includes the grounds for the decision; and no later than 6 months after the date where the contracting authority has notified the candidates and tenderers

About that award of a framework agreement, if the notification includes the grounds for the decision, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, section 4, No 1 and 2.

Compliant regarding a decision on shortlisting on procurement below the EU threshold must be submitted no later than 20 calendar days from the date after the contracting authority has sent a notification to the concerned candidates regarding who has been selected and this notification includes the grounds for the decision, cf. Law regarding Complaints board (in danish Klagenævnet for Udbud) § 7, Section 5.

Tjeneste, hvorfra der kan indhentes oplysninger om klageproceduren
Navn: Klagenævnet for Udbud
Postadresse: Nævnenes Hus, Toldboden 2
Postnummer: 8800
Telefon: +45 35291000 📞
E-mail: klfu@naevneneshus.dk 📧
Internetadresse: https://erhvervsstyrelsen.dk/klagevejledning-0 🌏
Kilde: OJS 2020/S 122-298714 (2020-06-23)

Bekendtgørelse om indgåede kontrakter (2020-08-06)
Objekt
Bekendtgørelsens metadata
Dokumenttype: Bekendtgørelse om indgåede kontrakter

Procedure
Bud-type: Finder ikke anvendelse

Reference
Datoer
Afsendelsesdato: 2020-08-06 📅
Offentliggørelsesdato: 2020-08-11 📅
Identifikatorer
Bekendtgørelsesnummer: 2020/S 154-376744
Henviser til bekendtgørelse: 2020/S 122-298714
EUT-S-nummer: 154
Yderligere oplysninger

Both received tenderbids are rejected as they do not meet the minimum requirements.

Objekt
Omfanget af udbuddet
Kort beskrivelse:

The National Genome Center (NGC) is established as an element of the realisation of the National Strategy for Personalised Medicine 2017-2020 and is intended to ensure governance and coordination of the strategy’s initiatives at the national level. The Danish efforts within Personalised Medicine are to focus on the patients.

Procedure
Kriterier for tildeling
Kvalitetskriterium (navn): Quality written responce
Kvalitetskriterium (vægtning): 40
Kvalitetskriterium (navn): Quality Demonstration
Pris (justeringskoefficient): 20

Supplerende oplysninger
Gennemgå organ
Oplysninger om frister for klageprocedurer:

Klagenævnet for Udbud) § 7, section 1. Complaint regarding the award of contract: complaint regarding the award of contract must be submitted no later than 45-calendar days from the date after the contracting authority has published a contract award notice in the European Union Official Journal informing that the contracting authority has awarded the contract, cf. Law regarding complaints board (in danish Klagenævnet for Udbud) § 7, section 2, No 1. Complaint regarding the award of a contract under a framework agreement with a reopening of the competition: complaint regarding the award of a contract under a framework agreement with a reopening of the competition must be submitted no later than 30-calendar days form the date after the contracting authority has notified the concerned tenderers that a contract has been awarded, if the notification includes the grounds for the decision, Cf. Law regarding complaints board (in danish Klagenævnet for Udbud) § 7, Section 2, No 2. Complaint regarding the award of a framework agreement: complaint regarding the award of a framework agreement must be submitted no later than 6 months from the date after the contracting authority have notified the concerned candidates and tenderers that award of contract has happened, cf. Law regarding the complaints board (in Danish Klagenævnet for Udbud) § 7, Section 2, No 3. Complaint regarding direct award of contract: complaint regarding the contracting authority’s award of contract without prior publication of a contract notice in the European Union Official Journal must be VI.4.4) submitted no later than 30 calendar days from the date after a contract award notice has been published by the contracting authority in the European Union Official Journal and that contract award notice includes the grounds for the decision to award the contract directly, cf. Law regarding complaints board (in danish Klagenævnet for Udbud) § 7, Section 3. Compliant regarding public procurements below the EU threshold: complaint regarding public procurements below the EU thre shold must be submitted no later than 45 calendar days from the date after the contracting authority has notified the tenderers about the award of contract if this notification includes the grounds for the decision and no later than 6 months after the date where the contracting authority has notified the candidates and tenderers

Oplysninger om frister for klageprocedurer

About that award of a framework agreement, if the notification includes the grounds for the decision, cf. Law regarding complaints board (in danish Klagenævnet for Udbud) § 7, section 4, No 1 and 2. Compliant regarding a decision on shortlisting on procurement below the EU threshold must be submitted no later than 20 calendar days from the date after the contracting authority has sent a notification to the concerned candidates regarding who has been selected and this notification includes the grounds for the decision, cf. Law regarding complaints board (in danish Klagenævnet for Udbud) § 7, section 5.

Kilde: OJS 2020/S 154-376744 (2020-08-06)

Nye indkøb inden for beslægtede kategorier 🆕

Programpakker og informationssystemer (3 nye indkøb)